Timothy,
When using shuttered lenses on focal plane shutter bodies (except the 202 FA) you can use either shutter.
Using CFE lenses as a condition for being able to use "the full range of digital backs" implies the lens shutter, not the focal plane shutter, must be used.
To do so, the camera's focal plane shutter is set to "C"-mode (not present on the 202FA, which is why this one is the exception), in which it functions like the two baffle doors in the 500-series cameras. The focal plane shutter is closed during composing, focussing, etc. and opens fully just after the lens shutter has closed, before the lens shutter starts its exposure cycle.
This timing is important, and is what distinguishes "C"-mode from "B"-setting, in which the first curtain is released a little bit later in the cycle.
The second curtain of the focal plane shutter then closes after the lens shutter has completed its cycle, when you let go of the release button.
So yes, both shutters work at the same time, but only one of them is responsible for timing the exposure.